miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|238071425|gb|GO948805.1|GO948805 GAAGAAGGAAAAGTGATCCGTGGAATTAATTCGTTAAGCAAACGAATACAGGATTTAATAAACCTATTTAAACAGCAGAG
GAAATAAAAAAAAGAAAAGCAGGAAAACAAACAGTCCTAATTACAACAGAGCAACAAAACCCAGAGAAAATCTAAGAACT
AGTGAACTTGGTAACAGCCTTGGTACCCTCAGAAACAGCATGTTTAGCAAGCTCGCCGGGCAAGACCAACCGGACGGCGG
TCTGAATCTCCCGGGAAGTGATGGTGGGCTTCTTATTGATCCTGGCCAATCGGGAAGATTCTCCGGCGAGCTTCTCGAAG
ATGTCGTTAATGAAGCTGTTCATTATACCCATGGCTTTGCTGGAGACGCCGATATCTGGGTGGACTTGCTTCAGCACCTT
GAAGATGTAGATCTTGTAAGTTTCCACGCTCTTCTTCGTCCTCTTCTTCTTCTTCTCTACTCCGCCCACCGCCGCCTTGC
CGGCGTCCTTCGGGAGCTTCTTGCCGGCCTTCGGCTTCTTCTCTGCCGCCGCCGCTGGAGACTTTTCTGCTGCGGTGGTT
TTCTTCTCCTCTGCCGCTGGCTTCTTCTCGGCGGGTTTCTTTTCTGCTGCCCTGGGAGCCATTTTTTTTTTTTTTGTTGC
TGGGTTTTGGTTTAGAATGAGGGTTTGTTTGGGAACCGACGAACTTGTAGACGGTCCAAACGCGTC




Most similar to sp|Q9FFC0|H2B10_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9FFC0|H2B10_ARATH Histone H2B.10 OS=Arabidopsis thaliana
           GN=At5g22880 PE=1 SV=3
          Length = 145

 Score =  173 bits (438), Expect = 1e-42
 Identities = 88/92 (95%), Positives = 91/92 (98%)
 Frame = -1

Query: 430 SVETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAGESSRLARINKKPTITSR 251
           +VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAGESS+LAR NKKPTITSR
Sbjct: 54  NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSR 113

Query: 250 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 155
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 114 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145